branchSplit.dissim: Branch split based on dissimilarity.

View source: R/branchSplit.R

branchSplit.dissimR Documentation

Branch split based on dissimilarity.

Description

Calculation of branch split based on a dissimilarity matrix. This function is used as a plugin for the dynamicTreeCut package and the user should not call this function directly. This function is experimental and subject to change.

Usage

branchSplit.dissim(
  dissimMat, 
  branch1, branch2, 
  upperP, 
  minNumberInSplit = 5, 
  getDetails = FALSE, ...)

Arguments

dissimMat

Dissimilarity matrix.

branch1

Branch 1.

branch2

Branch 2.

upperP

Percentile of (closest) objects to be considered.

minNumberInSplit

Minimum number of objects to be considered.

getDetails

Should details of the calculation be returned?

...

Other arguments for compatibility; currently unused.

Value

A single number or a list containing details of the calculation.

Author(s)

Peter Langfelder


WGCNA documentation built on April 23, 2022, 1:06 a.m.