aSPU | Sum of Powered Score (SPU) tests and adaptive SPU (aSPU) test... |
aSPUd | Adaptive Sum of powered score (SPU) tests (SPU and aSPU)... |
aSPUpath | Pathway based Sum of Powered Score tests (SPUpath) and... |
aSPUpath2 | Pathway based Sum of Powered Score tests (SPUpath) and... |
aSPUr | Robust Sum of powered score (SPU) tests and aSPU test for a... |
aSPUs | Sum of Powered Score (SPUs) tests and adaptive SPU (aSPUs)... |
aSPUsD | Sum of Powered Score (SPUs) tests and adaptive SPU (aSPUs)... |
aSPUsPath | Pathway based Sum of Powered Score tests (SPUsPath) and... |
aSPUsPath2 | Pathway based Sum of Powered Score tests (SPUsPath) and... |
aSPUw | Inverse variance weighted Sum of Powered Score tests (SPUw)... |
estcov | estcov |
exdat | An example data set |
GATES2 | Gene-based Association Test that uses an extended Simes... |
GatesSimes | GATES-Simes test for single trait - pathway association. |
GEEaSPU | The SPU and aSPU tests for multiple traits - single SNP... |
getlogitp | Get the p-values of the multiple SNPs based on the Wald test... |
Hyst | HYST (Hybrid Set-based Test) for single trait - pathway... |
kegg9 | A subset of coronary artery disease (CAD) data |
minP | minP test. |
MTaSPUs | The SPU and aSPU tests for multiple traits - single SNP... |
MTaSPUsSet | gene-Multitrait Sum of Powered Score (MTSPUsSet) tests and... |
MTaSPUsSetPath | Multitraits - Pathway based Sum of Powered Score tests... |
MTaSPUsSetScore | gene-Multitrait Sum of Powered Score (MTSPUsSetScore) tests... |
plotPmat | Image plot of P-value matrix. |
pruneSNP | Prune SNPs (related to aSPUs, aSPUsPath, MTaSPUsSet) |
SAMD11 | An example data for MTaSPUsSet test |
simPathAR1Snp | Simulating a pathway with multiple SNPs. |
someGs | An example data for MTaSPUsSet test |
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