Man pages for aSPU
Adaptive Sum of Powered Score Test

aSPUSum of Powered Score (SPU) tests and adaptive SPU (aSPU) test...
aSPUdAdaptive Sum of powered score (SPU) tests (SPU and aSPU)...
aSPUpathPathway based Sum of Powered Score tests (SPUpath) and...
aSPUpath2Pathway based Sum of Powered Score tests (SPUpath) and...
aSPUrRobust Sum of powered score (SPU) tests and aSPU test for a...
aSPUsSum of Powered Score (SPUs) tests and adaptive SPU (aSPUs)...
aSPUsDSum of Powered Score (SPUs) tests and adaptive SPU (aSPUs)...
aSPUsPathPathway based Sum of Powered Score tests (SPUsPath) and...
aSPUsPath2Pathway based Sum of Powered Score tests (SPUsPath) and...
aSPUwInverse variance weighted Sum of Powered Score tests (SPUw)...
estcovestcov
exdatAn example data set
GATES2Gene-based Association Test that uses an extended Simes...
GatesSimesGATES-Simes test for single trait - pathway association.
GEEaSPUThe SPU and aSPU tests for multiple traits - single SNP...
getlogitpGet the p-values of the multiple SNPs based on the Wald test...
HystHYST (Hybrid Set-based Test) for single trait - pathway...
kegg9A subset of coronary artery disease (CAD) data
minPminP test.
MTaSPUsThe SPU and aSPU tests for multiple traits - single SNP...
MTaSPUsSetgene-Multitrait Sum of Powered Score (MTSPUsSet) tests and...
MTaSPUsSetPathMultitraits - Pathway based Sum of Powered Score tests...
MTaSPUsSetScoregene-Multitrait Sum of Powered Score (MTSPUsSetScore) tests...
plotPmatImage plot of P-value matrix.
pruneSNPPrune SNPs (related to aSPUs, aSPUsPath, MTaSPUsSet)
SAMD11An example data for MTaSPUsSet test
simPathAR1SnpSimulating a pathway with multiple SNPs.
someGsAn example data for MTaSPUsSet test
aSPU documentation built on May 1, 2019, 7:04 p.m.