Description Usage Arguments Value Author(s) References See Also Examples
It gives a P-value image for a given P-value matrix.
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Ps |
P-value matrix. Row represent traits, column represent SNPs |
zlim |
-log 10 transformed p value range. |
main |
main title. |
yt |
it controls the location of trait names. |
xlab |
lable for x axis. Default is "SNPs". |
thresh |
Default is set to widely used genome wise threshold -log(5e-8,10). |
trait.names |
A vector of trait names. |
Image of P-values matrix.
Il-Youp Kwak and Wei Pan
Il-Youp Kwak, Wei Pan (2017) Gene- and pathway-based association tests for multiple traits with GWAS summary statistics, Bioinformatics. 33(1), 64-71
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