Get p-value using logistic regresion for each of the multiple SNPs
Response or phenotype data. It can be a disease indicator; =0 for controls, =1 for cases.
Genotype or other data; each row for a subject, and each column for an SNP (or a predictor). The value of each SNP is the # of the copies for an allele. A matrix with dimension n by p (n : number of observation, p : number of SNPs (or predictors) ).
p-values for each SNPs.
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