getAASub: Get amino acid substitutions from multiple sequence alignment
In aaSEA: Amino Acid Substitution Effect Analyser
Description
Usage
Arguments
Value
Examples
Description
Get amino acid substitutions from multiple sequence alignment
Usage
1
getAASub(fileLoc)
Arguments
fileLoc
exact location of multiple sequence alignment file in "FASTA" format
Value
Returns a list of two data frames 1.Single substitutions 2.Multiple substitutions
Examples
1
2
file = system.file("extdata", "linB_Prot_ali.fasta", package = "aaSEA")
getAASub(fileLoc = file)
aaSEA documentation built on Nov. 9, 2019, 5:07 p.m.
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Description Usage Arguments Value Examples
Description
Get amino acid substitutions from multiple sequence alignment
Usage
1 | getAASub(fileLoc)
|
Arguments
fileLoc |
exact location of multiple sequence alignment file in "FASTA" format |
Value
Returns a list of two data frames 1.Single substitutions 2.Multiple substitutions
Examples
1 2 | file = system.file("extdata", "linB_Prot_ali.fasta", package = "aaSEA")
getAASub(fileLoc = file)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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