This function implements the SDM method of Criscuolo et al. (2006) for a set of n distance matrices.
2n elements (with n > 1), the first n elements are the
distance matrices: these can be (symmetric) matrices, objects of
Reconstructs a consensus distance matrix from a set of input distance
matrices on overlapping sets of taxa. Potentially missing values in
the supermatrix are represented by
NA. An error is returned if
the input distance matrices can not resolve to a consensus matrix.
a 2-element list containing a distance matrix labelled by the union of the set of taxa of the input distance matrices, and a variance matrix associated to the returned distance matrix.
Andrei Popescu [email protected]
Criscuolo, A., Berry, V., Douzery, E. J. P. , and Gascuel, O. (2006) SDM: A fast distance-based approach for (super)tree building in phylogenomics. Systematic Biology, 55, 740–755.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.