API for apex
Phylogenetic Methods for Multiple Gene Data

Global functions
[,multidna,ANY,ANY,ANY-method Man page
[,multidna-method Man page
[,multiphyDat,ANY,ANY,ANY-method Man page
accessors Man page
add.gaps Man page
add.gaps,multidna-method Man page
add.gaps,multiphyDat-method Man page
apex Man page
apex-package Man page
checkIDs Source code
checkLocusNames Source code
concatenate Man page
concatenate,multidna-method Man page
concatenate,multiphyDat-method Man page
dist.multidna Man page Source code
find_gap_sequence Source code
getLocusNames Man page
getLocusNames,multidna Man page
getLocusNames,multidna-method Man page
getLocusNames,multiphyDat Man page
getLocusNames,multiphyDat-method Man page
getNumInd Man page
getNumInd,multidna-method Man page
getNumInd,multiphyDat Man page
getNumInd,multiphyDat-method Man page
getNumLoci Man page
getNumLoci,multidna Man page
getNumLoci,multidna-method Man page
getNumLoci,multiphyDat Man page
getNumLoci,multiphyDat-method Man page
getNumSequences Man page
getNumSequences,multidna Man page
getNumSequences,multidna-method Man page
getNumSequences,multiphyDat Man page
getNumSequences,multiphyDat-method Man page
getSequenceNames Man page
getSequenceNames,multidna Man page
getSequenceNames,multidna-method Man page
getSequenceNames,multiphyDat Man page
getSequenceNames,multiphyDat-method Man page
getSequences Man page
getSequences,multidna Man page
getSequences,multidna-method Man page
getSequences,multiphyDat Man page
getSequences,multiphyDat-method Man page
getTree Man page Source code
initialize,multidna-method Man page
initialize,multidna-methods Man page
initialize,multiphyDat-method Man page
initialize,multiphyDat-methods Man page
multidna Man page
multidna-class Man page
multidna2alignment Man page Source code
multidna2genind Man page Source code
multidna2multiphyDat Man page Source code
multiphyDat Man page
multiphyDat-class Man page
multiphyDat2alignment Man page Source code
multiphyDat2genind Man page Source code
multiphyDat2multidna Man page Source code
nMissingSequences Source code
new.multidna Man page
new.multiphyDat Man page
plot,multidna,ANY-method Man page
plot,multidna-method Man page
read.multiFASTA Man page Source code
read.multidna Man page Source code
read.multiphyDat Man page Source code
rm.gaps Man page
rm.gaps,multidna-method Man page
rm.gaps,multiphyDat-method Man page
sGapOnly Source code
sGapOnlyPhyDat Source code
setLocusNames<- Man page
setLocusNames<-,multidna Man page
setLocusNames<-,multidna-method Man page
setLocusNames<-,multiphyDat Man page
setLocusNames<-,multiphyDat-method Man page
show,multidna-method Man page
show,multiphyDat-method Man page
apex documentation built on May 29, 2017, 9:56 a.m.