TransformReport: The TransformReport class
In aroma.affymetrix: Analysis of Large Affymetrix Microarray Data Sets

TransformReport

R Documentation

The TransformReport class

Description

Package: aroma.affymetrix
Class TransformReport

Object
~~|
~~+--TransformReport

Directly known subclasses:

public static class TransformReport
extends Object

Usage

TransformReport(inSet=NULL, outSet=NULL, ...)

Arguments

`inSet`	The input data set as an `AffymetrixCelSet`.
`outSet`	The output data set as an `AffymetrixCelSet`.
`...`	Not used.

Fields and Methods

Methods:

	`getCdf`	-
	`getFullName`	Gets the full name of the output data set.
	`getInputDataSet`	Gets the source data set.
	`getName`	Gets the name of the output data set.
	`getOutputDataSet`	Gets the transformed data set.
	`getPath`	Gets the path of the output data set.
	`getTags`	Gets the tags of the output data set.
	`getUnitNamesFile`	-
	`getUnitTypesFile`	-
	`getYY`	-
	`nbrOfArrays`	-
	`plotXYCurve`	-
	`plotXYCurveLog2`	-
	`seq`	-
	`writeImageCombined`	-
	`writeImages`	-

Methods inherited from Object:
$, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis