plotDensity.GenomeInformation: Plots the density of SNPs for a given chromosome

Description Usage Arguments Value See Also

Description

Plots the density of SNPs for a given chromosome.

Usage

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## S3 method for class 'GenomeInformation'
plotDensity(this, chromosome, ..., adjust=1/20, xlab=NULL, main=NULL, annotate=TRUE)

Arguments

chromosome

The chromsome to be displayed.

...

Additional arguments passed to *getPositions().

adjust

A bandwidth parameter for the density estimator.

xlab

The label on the x-axis. If NULL, a default will generated.

main

The title of the plot. If NULL, a default will generated.

annotate

If TRUE, the plot is annotated with extra information.

Value

Returns (invisibly) the estimated density.

See Also

For more information see GenomeInformation.


aroma.affymetrix documentation built on May 29, 2017, 9:47 a.m.