inst/testScripts/robustness/chipTypes/Mapping10K_Xba142/01a.downloadAnnotData.R

library("aroma.core")
verbose <- Arguments$getVerbose(-8, timestamp=TRUE)
ar <- AromaRepository(verbose=TRUE)

verbose && enter(verbose, "Downloading annotation data")

chipType <- "Mapping10K_Xba142"
verbose && cat(verbose, "Chip type: ", chipType)

pathname <- downloadCDF(ar, chipType)
verbose && cat(verbose, "CDF: ", pathname)

pathname <- downloadACS(ar, chipType, tags=".*")
verbose && cat(verbose, "ACS: ", pathname)

pathname <- downloadUGP(ar, chipType, tags=".*")
verbose && cat(verbose, "UGP: ", pathname)

pathname <- downloadUFL(ar, chipType, tags=".*")
verbose && cat(verbose, "UFL: ", pathname)

verbose && exit(verbose)

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aroma.affymetrix documentation built on July 18, 2022, 5:07 p.m.