DiagPlot: Diagnostic plot for BCPA

In bcpa: Behavioral Change Point Analysis of Animal Movement

Diagnostic plot for BCPA

Description

Draws diagnostic plots for BCPA analysis. Specifically: a qqplot, a histogram (with a N(0,1) density curve), and an acf of the standardized residuals of an analysis.

Usage

DiagPlot(
  windowsweep,
  type = c("smooth", "flat")[1],
  plotme = TRUE,
  values = FALSE,
  ...
)

Arguments

windowsweep	a windowsweep object, i.e. the output of the WindowSweep analysis.
type	whether to diagnose the model fitted for a smooth or flat BCPA.
plotme	logical - whether or not to plot the diagnostics
values	logical - whether or not to return the values of the standardized residuals.
...	additional arguments to pass to the PartitionParameters function.

Value

If values is TRUE, returns the values of the standardized residuals.

Author(s)

Eliezer Gurarie

See Also

PartitionParameters

Examples

data(Simp)
if(!exists("Simp.VT"))
 Simp.VT <- GetVT(Simp)
if(!exists("Simp.ws"))
 Simp.ws <- WindowSweep(Simp.VT, "V*cos(Theta)", windowsize = 50, windowstep = 1, progress=TRUE)
DiagPlot(Simp.ws)
DiagPlot(Simp.ws, type="flat")
# The Simp's diagnostic plots are excellent.

bcpa documentation built on May 30, 2022, 5:07 p.m.