load.revised.otu: Loads a user-revised OTU table
In bio.infer: Predict Environmental Conditions from Biological Observations
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
If manual correction of the OTU selections is desired, these
corrections should be made on the "sum.otu.txt" file provided by
get.otu. The corrections should be saved as
tab-delimited text, and then load.revised.otu run.
Usage
1
load.revised.otu(bcnt.otu, otufname = "sum.otu.txt")
Arguments
bcnt.otu
Original benthic count file with OTU designations.
Output from get.otu
otufname
File name of revised OTU assignments.
Details
The benthic count data frame
is assumed to be the original output from get.otu, and
therefore has a field called TNAME.
Value
The script returns a new benthic count file that incorporates the
corrections to the OTU table.
Author(s)
Lester L. Yuan
See Also
bio.infer documentation built on Sept. 2, 2020, 5:08 p.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
If manual correction of the OTU selections is desired, these
corrections should be made on the "sum.otu.txt" file provided by
get.otu. The corrections should be saved as
tab-delimited text, and then load.revised.otu run.
Usage
1 | load.revised.otu(bcnt.otu, otufname = "sum.otu.txt")
|
Arguments
bcnt.otu |
Original benthic count file with OTU designations.
Output from |
otufname |
File name of revised OTU assignments. |
Details
The benthic count data frame
is assumed to be the original output from get.otu, and
therefore has a field called TNAME.
Value
The script returns a new benthic count file that incorporates the corrections to the OTU table.
Author(s)
Lester L. Yuan
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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