load.revised.species: Loads a user-revised list of species names
In bio.infer: Predict Environmental Conditions from Biological Observations
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
If manual correction of the species names assigned by get.taxonomic is desired, these
corrections should be made on the sum.tax.table.txt file.
The corrections should be saved as
tab-delimited text, and then load.revised.species run.
Usage
1
load.revised.species(bcnt.tax, fname)
Arguments
bcnt.tax
benthic count data frame that includes the full
taxonomic hierarchy for each taxon.
fname
Character string containing file name for the revised,
tab-delimited, file in the format of sum.tax.table.txt. See get.taxonomic.
Details
The script prompts the user to enter the name of the text file
containing the revised species names. The original "SPECIES" column
in bcnt.tax is deleted and the new, revised version is merged into
bcnt.tax.
Value
The script returns a new benthic count file that incorporates the
corrections to the species names
Author(s)
Lester L. Yuan
See Also
bio.infer documentation built on Sept. 2, 2020, 5:08 p.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
If manual correction of the species names assigned by get.taxonomic is desired, these
corrections should be made on the sum.tax.table.txt file.
The corrections should be saved as
tab-delimited text, and then load.revised.species run.
Usage
1 | load.revised.species(bcnt.tax, fname)
|
Arguments
bcnt.tax |
benthic count data frame that includes the full taxonomic hierarchy for each taxon. |
fname |
Character string containing file name for the revised,
tab-delimited, file in the format of |
Details
The script prompts the user to enter the name of the text file containing the revised species names. The original "SPECIES" column in bcnt.tax is deleted and the new, revised version is merged into bcnt.tax.
Value
The script returns a new benthic count file that incorporates the corrections to the species names
Author(s)
Lester L. Yuan
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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