as.select: Convert Atomic Indices to a Select Object

In bio3d: Biological Structure Analysis

Convert Atomic Indices to a Select Object

Description

Convert atomic indices to a select object with ‘atom’ and ‘xyz’ components.

Usage

as.select(x, ...)

Arguments

x	a numeric vector containing atomic indices to be converted to a ‘select’ object. Alternatively, a logical vector can be provided.
...	arguments passed to and from functions.

Details

Convert atomic indices to a select object with ‘atom’ and ‘xyz’ components.

Value

Returns a list of class "select" with the following components:

atom	a numeric matrix of atomic indices.
xyz	a numeric matrix of xyz indices.
call	the matched call.

Author(s)

Lars Skjaerven

References

Grant, B.J. et al. (2006) Bioinformatics 22, 2695–2696.

See Also

atom.select, read.pdb

Examples

as.select(c(1,2,3))

bio3d documentation built on Oct. 30, 2024, 1:08 a.m.