atom.index: Atom Names/Types

In bio3d: Biological Structure Analysis

Atom Names/Types

Description

This data set gives for various atom names/types the corresponding atomic symbols.

Usage

atom.index

Format

A data frame with the following components.

name

a character vector containing atom names/types.

symb

a character vector containing atomic symbols.

References

Grant, B.J. et al. (2006) Bioinformatics 22, 2695–2696.

See Also

elements, atom.index, atom2ele

Examples

data(atom.index)
atom.index

# Get the atomic symbol of some atoms
atom.names <- c("CA", "O", "N", "OXT")
atom.index[match(atom.names, atom.index$name), "symb"]

bio3d documentation built on Oct. 30, 2024, 1:08 a.m.