API for bulkAnalyseR
Interactive Shiny App for Bulk Sequencing Data

Global functions
%>% Man page
DEanalysis Man page
DEanalysis_deseq2 Man page Source code
DEanalysis_edger Man page Source code
DEpanel Man page
DEpanelApp Source code
DEpanelServer Man page Source code
DEpanelUI Man page Source code
DEplotPanel Man page
DEplotPanelApp Source code
DEplotPanelServer Man page Source code
DEplotPanelUI Man page Source code
DEsummaryPanel Man page
DEsummaryPanelApp Source code
DEsummaryPanelServer Man page Source code
DEsummaryPanelUI Man page Source code
GRNCisPanel Man page
GRNCisPanelServer Man page Source code
GRNCisPanelUI Man page Source code
GRNCustomPanel Man page
GRNCustomPanelServer Man page Source code
GRNCustomPanelUI Man page Source code
GRNTransPanel Man page
GRNTransPanelServer Man page Source code
GRNTransPanelUI Man page Source code
GRNpanel Man page
GRNpanelServer Man page Source code
GRNpanelUI Man page Source code
QCpanel Man page
QCpanelServer Man page Source code
QCpanelUI Man page Source code
calculate_condition_mean_sd_per_gene Man page Source code
crossPanel Man page
crossPanelServer Man page Source code
crossPanelUI Man page Source code
cross_plot Man page Source code
cross_plot_prep Source code
determine_uds Man page Source code
enrichmentPanel Man page
enrichmentPanelServer Man page Source code
enrichmentPanelUI Man page Source code
expression_heatmap Man page Source code
find_regulators_with_recurring_edges Man page Source code
generateAppFile Source code
generateDataFiles Source code
generateIntegrationDataFiles Source code
generateShinyApp Man page Source code
genes_barplot Man page Source code
get_link_list_rename Man page Source code
infer_GRN Man page Source code
jaccard_heatmap Man page Source code
jaccard_index Man page Source code
landingPanel Man page
landingPanelServer Man page Source code
landingPanelUI Man page Source code
ma_enhance Man page Source code
ma_plot Man page Source code
make_heatmap_matrix Man page Source code
make_pattern_matrix Man page Source code
modalityPanel Man page
modalityPanelServer Man page Source code
modalityPanelUI Man page Source code
noisyr_counts_with_plot Man page Source code
patternPanel Man page
patternPanelServer Man page Source code
patternPanelUI Man page Source code
plot_GRN Man page Source code
plot_line_pattern Man page Source code
plot_pca Man page Source code
plot_upset Man page Source code
preprocessExpressionMatrix Man page Source code
preprocess_miRTarBase Man page Source code
qc_density_plot Man page Source code
qc_ma_plot Source code
qc_violin_plot Man page Source code
rescale_matrix Man page Source code
sampleSelectPanel Man page
sampleSelectPanelApp Source code
sampleSelectPanelServer Man page Source code
sampleSelectPanelUI Man page Source code
scatter_plot Man page Source code
validateAppInputs Source code
validateIntegrationInputs Source code
volcano_enhance Man page Source code
volcano_plot Man page Source code
bulkAnalyseR documentation built on Dec. 28, 2022, 2:04 a.m.