get_link_list_rename: Convert the adjacency matrix to network links
In bulkAnalyseR: Interactive Shiny App for Bulk Sequencing Data
get_link_list_rename R Documentation
Convert the adjacency matrix to network links
Description
This function converts an adjacency matrix to a data frame
of network links, subset to the most important ones.
Usage
get_link_list_rename(weightMat, plotConnections)
Arguments
weightMat
the (weighted) adjacency matrix - regulators in rows,
targets in columns
plotConnections
the number of connections to subset to
Value
A data frame with fields from, to and value, describing the edges
of the network
Examples
weightMat <- matrix(
c(0.1, 0.4, 0.8, 0.3), nrow = 2, ncol = 2,
dimnames = list("regulators" = c("r1", "r2"), "targets" = c("t1", "t2"))
)
get_link_list_rename(weightMat, 2)
bulkAnalyseR documentation built on Dec. 28, 2022, 2:04 a.m.
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| get_link_list_rename | R Documentation |
Convert the adjacency matrix to network links
Description
This function converts an adjacency matrix to a data frame of network links, subset to the most important ones.
Usage
get_link_list_rename(weightMat, plotConnections)
Arguments
weightMat |
the (weighted) adjacency matrix - regulators in rows, targets in columns |
plotConnections |
the number of connections to subset to |
Value
A data frame with fields from, to and value, describing the edges of the network
Examples
weightMat <- matrix(
c(0.1, 0.4, 0.8, 0.3), nrow = 2, ncol = 2,
dimnames = list("regulators" = c("r1", "r2"), "targets" = c("t1", "t2"))
)
get_link_list_rename(weightMat, 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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