Files in campsis

Generic PK/PD Simulation Platform CAMPSIS

NEWS.md README.md R/declare_settings.R R/covariate.R R/distribution.R R/events.R R/occasion.R R/dose_adaptation.R R/treatment_iovs.R R/simulation_progress.R R/nocb_settings.R R/check.R R/utilities.R R/time_utilities.R R/internal_settings.R R/arm.R R/treatment_entry.R R/event_logic.R R/covariates.R R/event.R R/observations_set.R R/data.R R/simulate.R R/outfun.R R/treatment_iov.R R/generic.R R/arms.R R/hardware_settings.R R/dose_adaptations.R R/progress_settings.R R/solver_settings.R R/default_plot.R R/global.R R/scenarios.R R/scenario.R R/simulate_preprocess.R R/observations.R R/dataset_summary.R R/simulation_engine.R R/plan_setup.R R/time_entry.R R/bootstrap.R R/results_processing.R R/treatment.R R/dataset.R R/dataset_config.R R/seed.R R/protocol.R R/simulation_settings.R R/occasions.R R/parameter_uncertainty.R inst/doc/campsis.Rmd inst/doc/campsis.R tests/testthat.R tests/testthat/testSimulateEventsLogic.R tests/testthat/testCompilationError.R tests/testthat/testSimulateNocbLocf.R tests/testthat/testSimulateArguments.R tests/testthat/testSettings.R tests/testthat/testSeed.R tests/testthat/testEvent.R tests/testthat/testSimulateDeclare.R tests/testthat/testSimulateTable.R tests/testthat/testDataset.R tests/testthat/testOccasion.R tests/testthat/testSimulateBioavailability.R tests/testthat/testSimulateIOV.R tests/testthat/testParameterUncertainty.R tests/testthat/testSimulateTTEModels.R tests/testthat/testTimeUtilities.R tests/testthat/testSimulateBolus.R tests/testthat/testTreatment.R tests/testthat/testScenarios.R tests/testthat/testTreatmentEntry.R tests/testthat/testSimulateBolusInfusionSameCmt.R tests/testthat/testArm.R tests/testthat/testSimulateReplicates.R tests/testthat/testShowMethod.R tests/testthat/testDistribution.R tests/testthat/testSimulateInit.R tests/testthat/testObservations.R tests/testthat/testSimulateDoseAdaptation.R tests/testthat/testBootstrap.R tests/testthat/testEvents.R tests/testthat/testSimulateNoOmega.R tests/testthat/testDoseAdaptation.R tests/testthat/testDefaultPlots.R tests/testthat/testScenario.R tests/testthat/testUtils.R tests/testthat/testSimulateScenarios.R tests/testthat/testSimulateRUV.R tests/testthat/testCovariates.R tests/testthat/testOccasions.R tests/testthat/testSimulateEvents.R tests/testthat/testSimulateOutvars.R tests/testthat/testCovariate.R tests/testthat/testSimulateInfusion.R tests/testthat/testDatasetExportParallelisation.R tests/testthat/testSimulateTSLD.R tests/testthat/testSimulateTimeVaryingCovariates.R tests/testthat/testArms.R tests/testthat/testSimulateDosingInfo.R tests/testthat/testSimulateMinimalistModel.R tests/testthat/testSimulateLagTime.R tests/testthat/testSimulateWeirdCases.R vignettes/campsis.Rmd vignettes/resources/Targets_Squeletton/_targets.R vignettes/resources/Targets_Squeletton/R/my_script.R vignettes/resources/Targets_Squeletton_Parallel/_targets.R vignettes/resources/Targets_Squeletton_Parallel/R/my_script.R man/getSeedForParametersSampling.Rd man/events-class.Rd man/preprocessTablefun.Rd man/bootstrap_distribution-class.Rd man/PI.Rd man/internal_settings-class.Rd man/occasion-class.Rd man/getSeedForDatasetExport.Rd man/exportTableDelegate.Rd man/observations-class.Rd man/DatasetConfig.Rd man/output_function-class.Rd man/DatasetSummary.Rd man/simulation_engine-class.Rd man/covariates-class.Rd man/undefined_distribution-class.Rd man/fillIOVOccColumns.Rd man/preprocessReplicates.Rd man/getSeed.Rd man/BinomialDistribution.Rd man/Arm.Rd man/splitDataset.Rd man/sample.Rd man/years.Rd man/dosingOnly.Rd man/preprocessDosing.Rd man/sampleDistributionAsTibble.Rd man/Events.Rd man/simulateDelegate.Rd man/getEventIterations.Rd man/dose_adaptations-class.Rd man/standardiseTime.Rd man/toDatasetSummary.Rd man/minutes.Rd man/isEmptyBootstrap.Rd man/exportDelegate.Rd man/mergeTimeVaryingCovariates.Rd man/preprocessDest.Rd man/preprocessEvents.Rd man/processArmLabels.Rd man/time_varying_covariate-class.Rd man/checkIIandADDL.Rd man/counterBalanceLocfMode.Rd man/getColumn.Rd man/IOV.Rd man/simulation_progress-class.Rd man/cutTableForEvent.Rd man/Observations.Rd man/mrgsolve_engine-class.Rd man/treatment_iov-class.Rd man/setLabel.Rd man/Settings.Rd man/declare_settings-class.Rd man/getSplittingConfiguration.Rd man/progress_settings-class.Rd man/function_distribution-class.Rd man/leftJoinIIV.Rd man/setSeed.Rd man/Outfun.Rd man/applyCompartmentCharacteristics.Rd man/months.Rd man/counterBalanceNocbMode.Rd man/fixed_covariate-class.Rd man/treatment-class.Rd man/Solver.Rd man/TimeVaryingCovariate.Rd man/campsis_handler.Rd man/EventCovariate.Rd man/event_covariate-class.Rd man/computeIncrementalProgress.Rd man/arms-class.Rd man/occasions-class.Rd man/EventRelatedObservations.Rd man/length-arm-method.Rd man/getTimeVaryingCovariates.Rd man/scenario-class.Rd man/preprocessNocbvars.Rd man/Dataset.Rd man/factorScenarios.Rd man/preprocessScenarios.Rd man/UniformDistribution.Rd man/event-class.Rd man/preprocessOutvars.Rd man/solver_settings-class.Rd man/dataset_config-class.Rd man/scenarios-class.Rd man/simulateScenarios.Rd man/generateIIV_.Rd man/getFurrrScheduling.Rd man/getInitialConditions.Rd man/preprocessOutfun.Rd man/sampleTimeVaryingCovariates.Rd man/getDatasetMaxTime.Rd man/Progress.Rd man/Occasion.Rd man/preprocessArmColumn.Rd man/applyScenario.Rd man/DiscreteDistribution.Rd man/preprocessIds.Rd man/assignDoseNumber.Rd man/convertTime.Rd man/days.Rd man/simulateDelegateCore.Rd man/uniteColumns.Rd man/Bolus.Rd man/getAvailableTimeUnits.Rd man/nhanes.Rd man/dropOthers.Rd man/DoseAdaptation.Rd man/Covariate.Rd man/distribution-class.Rd man/scatterPlot.Rd man/SimulationProgress.Rd man/observations_set-class.Rd man/fixed_distribution-class.Rd man/weeks.Rd man/getTimes.Rd man/NormalDistribution.Rd man/getFixedCovariates.Rd man/setupPlanSequential.Rd man/shadedPlot.Rd man/seconds.Rd man/arm-class.Rd man/rxode_engine-class.Rd man/ConstantDistribution.Rd man/sampleCovariatesList.Rd man/getSeedForIteration.Rd man/preprocessTSLDAndTDOSColumn.Rd man/preprocessSlices.Rd man/getTimeVaryingVariables.Rd man/removeInitialConditions.Rd man/Declare.Rd man/simulate.Rd man/Event.Rd man/ParameterDistribution.Rd man/nocb_settings-class.Rd man/getEventCovariates.Rd man/spaghettiPlot.Rd man/processAllTimeColumns.Rd man/obsOnly.Rd man/hours.Rd man/getIOVs.Rd man/simulation_settings-class.Rd man/dose_adaptation-class.Rd man/retrieveParameterValue.Rd man/toExplicitDistribution.Rd man/LogNormalDistribution.Rd man/bolus-class.Rd man/getOccasions.Rd man/FunctionDistribution.Rd man/bootstrap-class.Rd man/infusion-class.Rd man/EtaDistribution.Rd man/VPC.Rd man/NOCB.Rd man/Infusion.Rd man/getCovariates.Rd man/generateIIV.Rd man/Scenarios.Rd man/FixedDistribution.Rd man/processSimulateArguments.Rd man/reorderColumns.Rd man/hardware_settings-class.Rd man/setupPlanDefault.Rd man/length-dataset-method.Rd man/importCampsismodToNamespace.Rd man/getRandomSeedValue.Rd man/BootstrapDistribution.Rd man/covariate-class.Rd man/protocol-class.Rd man/constant_distribution-class.Rd man/getSimulationEngineType.Rd man/EventIteration.Rd man/treatment_iovs-class.Rd man/processDropOthers.Rd man/Bootstrap.Rd man/Hardware.Rd man/Scenario.Rd man/vpcPlot.Rd man/setSubjects.Rd man/preprocessSettings.Rd man/dataset-class.Rd