check_bad_markers: Checks for unused markers

View source: R/check_bad_markers.R

check_bad_markersR Documentation

Checks for unused markers

Description

This function checks for markers that aren't used in cape. For example, markers on sex chromosomes, or mitochondrial markers. It also removes any markers that are invariant across all individuals.

Usage

check_bad_markers(data_obj, geno_obj)

Arguments

data_obj

a Cape object

geno_obj

a genotype object


cape documentation built on May 29, 2024, 5:11 a.m.