get_marker_location: Get marker genomic position

In cape: Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice

Get marker genomic position

Description

Given a vector of marker names or numbers, this function returns the genomic coordinates for each marker, not including the chromosome number, which is retrieved using get_marker_chr.

Usage

get_marker_location(data_obj, markers)

Arguments

data_obj	a Cape object
markers	A vector of marker names

Value

A vector the same length as the input markers vector indicating the genomic coordinate of each marker.

Examples

## Not run: 
marker_names <- dimnames(geno_obj)[[3]]
marker_loc <- get_marker_location(data_obj, marker_names)

## End(Not run)

cape documentation built on May 20, 2022, 1:06 a.m.