API for cape
Combined Analysis of Pleiotropy and Epistasis

Global functions
bin.vector Man page Source code
calc.delta.errors Man page Source code
calc.p Man page Source code
cape Man page
cape-package Man page
consec.pairs Man page Source code
delete.pheno Man page Source code
direct.influence Man page Source code
error.prop Man page Source code
filter.hwe Man page Source code
filter.maf Man page Source code
genome.wide.threshold.1D Man page Source code
genome.wide.threshold.1D.parallel Man page Source code
get.chr.markers Man page Source code
get.col Man page Source code
get.col.num Man page Source code
get.covar Man page Source code
get.eigentraits Man page Source code
get.geno Man page Source code
get.geno.with.covar Man page Source code
get.layout.mat Man page Source code
get.linearly.independent Man page Source code
get.marker.chr Man page Source code
get.marker.idx Man page Source code
get.marker.location Man page Source code
get.marker.name Man page Source code
get.marker.num Man page Source code
get.marker.val Man page Source code
get.network Man page Source code
get.pairs.for.pairscan Man page Source code
get.pheno Man page Source code
histPheno Man page Source code
impute.missing.geno Man page Source code
kinship Man page Source code
kinship.on.the.fly Man page Source code
linkage.blocks.network Man page Source code
make.data.obj Man page Source code
marker2covar Man page Source code
myImagePlot Man page Source code
norm.pheno Man page Source code
obesity.cross Man page
one.pairscan.parallel Man page Source code
one.singlescan Man page Source code
pair.matrix Man page Source code
pairscan Man page Source code
pairscan.kin Man page Source code
pairscan.noKin Man page Source code
pairscan.null Man page Source code
pheno2covar Man page Source code
plotCollapsedVarInf Man page Source code
plotNetwork Man page Source code
plotPairscan Man page Source code
plotPheno Man page Source code
plotPhenoCor Man page Source code
plotSVD Man page Source code
plotSinglescan Man page Source code
plotSinglescan.heat Man page Source code
plotVariantInfluences Man page Source code
qqPheno Man page Source code
read.geno Man page Source code
read.pheno Man page Source code
read.population Man page Source code
remove.ind Man page Source code
remove.markers Man page Source code
report.progress Man page Source code
rotate.mat Man page Source code
rz.transform Man page Source code
segment.region Man page Source code
select.by.chr Man page Source code
select.by.ind Man page Source code
select.eigentraits Man page Source code
select.markers.for.pairscan Man page Source code
select.pheno Man page Source code
singlescan Man page Source code
sortByThenBy Man page Source code
sortCross Man page Source code
writePopulation Man page Source code
writeVariantInfluences Man page Source code
cape documentation built on May 29, 2017, 4:49 p.m.