API for cbioportalR
Browse and Query Clinical and Genomic Data from cBioPortal
| Global functions | |
|---|---|
| %>% | Man page |
| %||% | Man page |
| .check_for_patient_id | Source code |
| .check_for_study_id | Source code |
| .check_input_pair_df | Source code |
| .get_cbioportal_url | Source code |
| .get_clinical_by_list_item | Man page Source code |
| .get_clinical_pat_by_list_item | Man page Source code |
| .get_data_by_sample | Man page Source code |
| .get_data_by_study | Man page Source code |
| .resolve_url | Source code |
| available_clinical_attributes | Man page |
| available_gene_panels | Man page |
| available_patients | Man page |
| available_profiles | Man page |
| available_sample_lists | Man page |
| available_samples | Man page |
| available_studies | Man page Source code |
| cbioportalR | Man page |
| cbioportalR-package | Man page |
| cbp_api | Man page Source code |
| get_alias | Man page Source code |
| get_cbioportal_token | Man page Source code |
| get_clinical_by_patient | Man page Source code |
| get_clinical_by_sample | Man page Source code |
| get_clinical_by_study | Man page |
| get_cna_by_sample | Man page Source code |
| get_cna_by_study | Man page Source code |
| get_entrez_id | Man page Source code |
| get_fusions_by_sample | Man page Source code |
| get_fusions_by_study | Man page Source code |
| get_gene_panel | Man page Source code |
| get_genes | Man page |
| get_genetics_by_sample | Man page Source code |
| get_genetics_by_study | Man page Source code |
| get_hugo_symbol | Man page Source code |
| get_mutations_by_sample | Man page Source code |
| get_mutations_by_study | Man page Source code |
| get_panel_by_sample | Man page Source code |
| get_samples_by_patient | Man page Source code |
| get_segments_by_sample | Man page Source code |
| get_segments_by_study | Man page Source code |
| get_structural_variants_by_sample | Man page |
| get_structural_variants_by_study | Man page |
| get_study_info | Man page Source code |
| impact_gene_info | Man page |
| null-default | Man page |
| print.cbp_api | Source code |
| set_cbioportal_db | Man page Source code |
| test_cbioportal_db | Man page Source code |
