available_profiles: Get Available Genomic Profiles For a Study or Database

In cbioportalR: Browse and Query Clinical and Genomic Data from cBioPortal

Get Available Genomic Profiles For a Study or Database

Description

Get Available Genomic Profiles For a Study or Database

Usage

available_profiles(study_id = NULL, base_url = NULL)

Arguments

study_id	A character vector of length 1 indicating study_id. See get_studies() to see all available studies for your URL. If NULL, it will return all profiles for your current database url
base_url	The database URL to query. If NULL will default to URL set with ⁠set_cbioportal_db(<your_db>)⁠

Value

A dataframe of available genetic profiles and their profile ids

Examples

## Not run: 
set_cbioportal_db("public")
available_profiles()
available_profiles(study_id = "acc_tcga")

## End(Not run)

cbioportalR documentation built on Oct. 6, 2023, 1:07 a.m.