R/explore.R In climwin: Climate Window Analysis

Documented in explore

```#'Visualise the weight distribution for given parameter values
#'
#'Create a plot of the Weibull or Generalised Extreme Values (GEV) distribution
#'for given values of shape, scale and location parameters. Used to determine
#'@param shape A parameter that determines the shape of the distribution.
#' Should be greater than 0.
#'@param scale A parameter that determines the scale of the distribution.
#' Should be greater than 0.
#'@param loc A parameter that determines the location of the distribution.
#' Should be less than or equal to 0.
#'@param weightfunc Choose whether to use a weibull ("W") or GEV ("G")
#' distribution.
#'@return explore will return an example plot of the distribution using
#' given parameter values. This can be used to select the initial parameter
#'@author Martijn van de Pol and Liam D. Bailey
#'@examples
#'# Test a weibull distribution
#'
#'explore(shape = 3, scale = 0.2, loc = 0, weightfunc = "W")
#'
#'# Test a GEV distribution
#'
#'explore(shape = 3, scale = 5, loc = -5, weightfunc = "G")
#'
#'@export

explore <- function(shape = 1, scale = 1, loc = 0, weightfunc = "W"){
par(mfrow = c(1, 1))
duration <- 365
j        <- seq(1:duration) / duration
k        <- seq(-10, 10, by = (2 * 10 / duration))

if (weightfunc == "W"){
if (shape <= 0){
stop("Weibull shape parameter should be >0")
}

if (scale <= 0){
stop("Weibull scale parameter should be >0")
}

if (loc > 0){
stop("Weibull location parameter should be <=0")
}

weight <- weibull3(x = j[1:duration], shape = shape, scale = scale, location = loc)
weight[is.na(weight)] <- 0

if (sum(weight) == 0){
weight <- weight + 1
}

title <- c("Weibull", paste("shape=", shape, "scale=", scale, "location=", loc))
plot((weight / sum(weight)), type = "l", ylab = "Weight", xlab = "", main = title, xaxt = 'n',
cex.lab = 1.25, cex.axis = 1.25, cex = 1.5, mgp = c(2.5, 1, 0))
mtext("Time steps", side = 1 , line = 1, cex = 1.25)
}

if (weightfunc == "G"){
if (scale <= 0){
stop("GEV scale parameter should be >0")
}
weight <- dgev(k[1:duration], loc = loc, scale = scale, shape = shape, log = FALSE)
weight[is.na(weight)] <- 0

if (sum(weight) == 0){
weight <- weight + 1
}
title <- c("GEV", paste("shape=", shape, "scale=", scale, "location=", loc))
plot((weight / sum(weight)), type = "l", ylab = "Weight", xlab = "", main = title, xaxt = 'n',
cex.lab = 1.25, cex.axis = 1.25, cex = 1.5, mgp = c(2.5, 1, 0))
mtext("Time steps", side = 1 , line = 1, cex = 1.25)
}
}
```

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climwin documentation built on Nov. 17, 2017, 7:34 a.m.