Heterogeneous_Effect: Individual level data for 2 traits and 2 causal variants with...
In colocboost: Multi-Context Colocalization Analysis for QTL and GWAS Studies
Heterogeneous_Effect R Documentation
Individual level data for 2 traits and 2 causal variants with heterogeneous effects
Description
An example dataset with simulated genotypes and traits for 2 traits and 2 common causal variants with heterogeneous effects
Usage
Heterogeneous_Effect
Format
Heterogeneous_Effect
A list with 3 elements
- X
List of genotype matrices
- Y
List of traits
- variant
indices of two causal variants
Source
The Heterogeneous_Effect dataset contains 2 simulated phenotypes alongside corresponding genotype matrices.
There are two causal variants, both of which have heterogeneous effects on two traits.
Due to the file size limitation of CRAN release, this is a subset of simulated data to generate Figure 2b in Cao etc. 2025.
See full dataset in colocboost paper repo https://github.com/StatFunGen/colocboost-paper.
See Also
Other colocboost_data:
Ambiguous_Colocalization,
Ind_5traits,
Non_Causal_Strongest_Marginal,
Sumstat_5traits,
Weaker_GWAS_Effect
colocboost documentation built on June 8, 2025, 11:07 a.m.
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| Heterogeneous_Effect | R Documentation |
Individual level data for 2 traits and 2 causal variants with heterogeneous effects
Description
An example dataset with simulated genotypes and traits for 2 traits and 2 common causal variants with heterogeneous effects
Usage
Heterogeneous_Effect
Format
Heterogeneous_Effect
A list with 3 elements
- X
List of genotype matrices
- Y
List of traits
- variant
indices of two causal variants
Source
The Heterogeneous_Effect dataset contains 2 simulated phenotypes alongside corresponding genotype matrices. There are two causal variants, both of which have heterogeneous effects on two traits. Due to the file size limitation of CRAN release, this is a subset of simulated data to generate Figure 2b in Cao etc. 2025. See full dataset in colocboost paper repo https://github.com/StatFunGen/colocboost-paper.
See Also
Other colocboost_data:
Ambiguous_Colocalization,
Ind_5traits,
Non_Causal_Strongest_Marginal,
Sumstat_5traits,
Weaker_GWAS_Effect
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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