covid19.analytics
Load and Analyze Live Data from the COVID-19 Pandemic

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covid19.analytics: Load and Analyze Live Data from the COVID-19 Pandemic
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Load and Analyze Live Data from the COVID-19 Pandemic

MD5
NEWS
README.md
NAMESPACE
DESCRIPTION
R/covid19_plts.R R/covid19_trends.R R/covid19_dashboard-wrapper.R R/covid19_Canada.R R/covid19_anal.R R/aux_geos.R R/covid19.R R/covid19_genomic.R R/covid19_rollingEstimates.R R/tor_utils.R R/pandemics.R R/covid19_vaccination_testing.R R/covid19_print.R R/aux_IOutils.R R/aux_utils.R R/covid19_seq.R R/covid19_models.R R/covid19_dashboard.R R/covid19_checks.R R/aux_stats.R
inst/CITATION
inst/doc/covid19.analytics.R inst/doc/covid19.analytics.Rmd
inst/doc/covid19.analytics.html
inst/extdata/time_series_covid19_deaths_global.csv.RDS
inst/extdata/time_series_covid19_confirmed_global.csv.RDS
inst/extdata/time_series_covid19_confirmed_US.csv.RDS
inst/extdata/NC_045512.2.rds
inst/extdata/covid19_openData_Toronto.RDS
inst/extdata/time_series_19-covid-Confirmed.csv.RDS
inst/extdata/time_series_19-covid-Recovered.csv.RDS
inst/extdata/covid19_Toronto.xlsx
inst/extdata/time_series_19-covid-Deaths.csv.RDS
inst/extdata/Coronaviridae_runs.csv.rds
inst/extdata/pandemics_vaccines.RDS
inst/extdata/latest.RDS
inst/extdata/02-01-2021.csv.RDS
inst/extdata/cv19tree.rds
inst/extdata/time_series_covid19_recovered_global.csv.RDS
inst/extdata/pandemics.RDS
inst/extdata/GCF_009858895.2_ASM985889v3_genomic.gff.gz
inst/extdata/time_series_covid19_deaths_US.csv.RDS
inst/extdata/lastest.RDS
inst/extdata/c19.fasta
inst/extdata/README.txt
build/vignette.rds
tests/testthat.R tests/testthat/test_examples.R tests/testthat/covid19_checks_tests.R vignettes/covid19.analytics.Rmd vignettes/man/select.per.loc.Rd vignettes/man/badOption.Rd vignettes/man/avecRentrez.Rd vignettes/man/preProcessingData.Rd vignettes/man/mtrends.Rd vignettes/man/tots.per.location.Rd vignettes/man/estimateRRs.Rd vignettes/man/chk.TS.data.Rd vignettes/man/simple.SIR.ODE.Rd vignettes/man/covid19.testing.data.Rd vignettes/man/geographicalRegions.Rd vignettes/man/covid19.JHU.data.Rd vignettes/man/c19.OWID.data.Rd vignettes/man/integrity.check.Rd vignettes/man/c19.ptree.data.Rd vignettes/man/loadLibrary.Rd vignettes/man/itrends.Rd vignettes/man/set.plt.canvas.Rd vignettes/man/mrollingRates.Rd vignettes/man/report.Tor.Rd vignettes/man/gen.glm.model.Rd vignettes/man/getFile.Rd vignettes/man/data.checks.Rd vignettes/man/totals.plt.Rd vignettes/man/covid19.genomic.data.Rd vignettes/man/pandemics.data.Rd vignettes/man/c19.refGenome.data.Rd vignettes/man/OWID.repos.Rd vignettes/man/c19.genomic.data.Rd vignettes/man/log.sc.setup.Rd vignettes/man/rollingRate.Rd vignettes/man/X.covid19.genomic.data.Rd vignettes/man/covid19.US.data.Rd vignettes/man/confBand.Rd vignettes/man/checkGeoLoc.Rd vignettes/man/header.Rd vignettes/man/genModel.Rd vignettes/man/single.trend.Rd vignettes/man/nullify.data.Rd vignettes/man/live.map.Rd vignettes/man/covid19dashboard.Rd vignettes/man/pandemics.loaddata.Rd vignettes/man/header0.Rd vignettes/man/print.Rd vignettes/man/covid19.Toronto_city.data.Rd vignettes/man/covid19.vaccination.Rd vignettes/man/covid19.Toronto.data.Rd vignettes/man/consistency.check.Rd vignettes/man/c19.NPs.data.Rd vignettes/man/growth.rate.Rd vignettes/man/movingFn.Rd vignettes/man/covid19Explorer.Rd vignettes/man/covid19.Toronto_OD.data.Rd vignettes/man/sweep.SIR.models.Rd vignettes/man/print.report.Rd vignettes/man/generate.SIR.model.Rd vignettes/man/covid19.Canada.data.Rd vignettes/man/covid19.data.Rd vignettes/man/plt.SIR.model.Rd vignettes/man/report.summary.Rd vignettes/man/covid19.URL_csv.data.Rd vignettes/man/red.devel.ver.Rd vignettes/man/c19.fasta.data.Rd vignettes/man/c19.NP_fasta.data.Rd
vignettes/man/figures/mathing.DAILY.CHANGES.sh
vignettes/man/figures/SIR-model-Germany.pdf vignettes/man/figures/Japan_deaths.pdf
vignettes/man/figures/DAILY.CHANGES
vignettes/man/figures/covid19-SummaryReport.txt
vignettes/man/figures/heatmap-changes.pdf vignettes/man/figures/heatmap-growthRate.pdf vignettes/man/figures/trendTor.pdf vignettes/man/figures/gr-changes_Italy.pdf vignettes/man/figures/report-summ-agg.pdf vignettes/man/figures/gr-changes_Germany.pdf vignettes/man/figures/Germany_totals.pdf vignettes/man/figures/Ontario_totals.pdf vignettes/man/figures/Japan_recovered.pdf vignettes/man/figures/covid19-SummaryReport.pdf vignettes/man/figures/Hubei_totals.pdf vignettes/man/figures/gr-changes_Canada.pdf vignettes/man/figures/SIR-model-Ontario.pdf vignettes/man/figures/gr-changes_Hubei.pdf vignettes/man/figures/Ontario_recovered.pdf vignettes/man/figures/changes-per-day-2.pdf vignettes/man/figures/SIR-model-Canada.pdf vignettes/man/figures/changes-per-day-1.pdf vignettes/man/figures/report-summ-TSconfirmed.pdf vignettes/man/figures/Japan_confirmed.pdf vignettes/man/figures/Italy_totals.pdf man/select.per.loc.Rd man/badOption.Rd man/avecRentrez.Rd man/preProcessingData.Rd man/mtrends.Rd man/tots.per.location.Rd man/estimateRRs.Rd man/chk.TS.data.Rd man/simple.SIR.ODE.Rd man/covid19.testing.data.Rd man/geographicalRegions.Rd man/covid19.JHU.data.Rd man/c19.OWID.data.Rd man/integrity.check.Rd man/c19.ptree.data.Rd man/loadLibrary.Rd man/itrends.Rd man/set.plt.canvas.Rd man/mrollingRates.Rd man/report.Tor.Rd man/gen.glm.model.Rd man/getFile.Rd man/data.checks.Rd man/totals.plt.Rd man/covid19.genomic.data.Rd man/pandemics.data.Rd man/c19.refGenome.data.Rd man/OWID.repos.Rd man/c19.genomic.data.Rd man/log.sc.setup.Rd man/rollingRate.Rd man/X.covid19.genomic.data.Rd man/covid19.US.data.Rd man/confBand.Rd man/checkGeoLoc.Rd man/header.Rd man/genModel.Rd man/single.trend.Rd man/nullify.data.Rd man/live.map.Rd man/covid19dashboard.Rd man/pandemics.loaddata.Rd man/header0.Rd man/print.Rd man/covid19.Toronto_city.data.Rd man/covid19.vaccination.Rd man/covid19.Toronto.data.Rd man/consistency.check.Rd man/c19.NPs.data.Rd man/growth.rate.Rd man/movingFn.Rd man/covid19Explorer.Rd man/covid19.Toronto_OD.data.Rd man/sweep.SIR.models.Rd man/print.report.Rd man/generate.SIR.model.Rd man/covid19.Canada.data.Rd man/covid19.data.Rd man/plt.SIR.model.Rd man/report.summary.Rd man/covid19.URL_csv.data.Rd man/red.devel.ver.Rd man/c19.fasta.data.Rd man/c19.NP_fasta.data.Rd
man/figures/mathing.DAILY.CHANGES.sh
man/figures/SIR-model-Germany.pdf man/figures/Japan_deaths.pdf
man/figures/DAILY.CHANGES
man/figures/covid19-SummaryReport.txt
man/figures/heatmap-changes.pdf man/figures/heatmap-growthRate.pdf man/figures/trendTor.pdf man/figures/gr-changes_Italy.pdf man/figures/report-summ-agg.pdf man/figures/gr-changes_Germany.pdf man/figures/Germany_totals.pdf man/figures/Ontario_totals.pdf man/figures/Japan_recovered.pdf man/figures/covid19-SummaryReport.pdf man/figures/Hubei_totals.pdf man/figures/gr-changes_Canada.pdf man/figures/SIR-model-Ontario.pdf man/figures/gr-changes_Hubei.pdf man/figures/Ontario_recovered.pdf man/figures/changes-per-day-2.pdf man/figures/SIR-model-Canada.pdf man/figures/changes-per-day-1.pdf man/figures/report-summ-TSconfirmed.pdf man/figures/Japan_confirmed.pdf man/figures/Italy_totals.pdf
covid19.analytics documentation built on Oct. 16, 2023, 1:06 a.m.

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