avecRentrez: function to query NCBI database servers using the "rentrex"...
In covid19.analytics: Load and Analyze Live Data from the COVID-19 Pandemic
View source: R/covid19_genomic.R
avecRentrez R Documentation
function to query NCBI database servers using the "rentrex" library
Description
function to query NCBI database servers using the "rentrex" library
Usage
avecRentrez(
DB = "nucleotide",
max.nr.recs = 20000,
chunkSize = 100,
accOnly = TRUE
)
Arguments
DB
database
max.nr.recs
maximun number of records to retrieve, there are limitations in the fns and server sides
chunkSize
number of records to retrieve at once
accOnly
boolean indicator for getting only accession codes or whole records
covid19.analytics documentation built on Oct. 16, 2023, 1:06 a.m.
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View source: R/covid19_genomic.R
| avecRentrez | R Documentation |
function to query NCBI database servers using the "rentrex" library
Description
function to query NCBI database servers using the "rentrex" library
Usage
avecRentrez(
DB = "nucleotide",
max.nr.recs = 20000,
chunkSize = 100,
accOnly = TRUE
)
Arguments
DB |
database |
max.nr.recs |
maximun number of records to retrieve, there are limitations in the fns and server sides |
chunkSize |
number of records to retrieve at once |
accOnly |
boolean indicator for getting only accession codes or whole records |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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