getRulesAsStrings: Represent binary rule matrix as strings

In crso: Cancer Rule Set Optimization ('crso')

Description

Represent binary rule matrix as strings

Usage

getRulesAsStrings(rm)

Arguments

rm	binary rule matrix

Value

vector or rules represented as strings

Examples

library(crso)
data(skcm)
list2env(skcm.list,envir=globalenv())
rm.full <- buildRuleLibrary(D,rule.thresh = 0.1) # Small rule library matrix, dimension: 5 x 71
getRulesAsStrings(rm.full)
# output should be: "BRAF-M.CDKN2A-MD"   "CDKN2A-MD.NRAS-M"
# "BRAF-M.PTEN-MD"    "ADAM18-M.BRAF-M" "ADAM18-M.CDKN2A-MD"

crso documentation built on July 7, 2019, 5:02 p.m.