Files in ctsem

Continuous Time Structural Equation Modelling

NEWS.md README.md R/ctCompare.R R/ctsem-package.R R/llsurface.R R/ctWideToLong.R R/stanmodels.R R/ctIntervalise.R R/ctFitMultiModel.R R/ctTransforms.R R/stanoptimis.R R/covml.R R/ctLabel.R R/modelchecking.R R/ctStanContinuousPars.R R/listOfMatrices.R R/stan_confidenceRegion.R R/ctIndplot.R R/ctStanModelWriter.R R/databasedTIpreds.R R/ctLOO.R R/ctACF.R R/ctModelHigherOrder.R R/ctsmupdate.R R/ctStanPlotPost.R R/ctLongtowide.r R/tformshapes.R R/ctJacobian.R R/summary.ctStanFit.R R/sdpcor2cov.R R/stan_postcalc.R R/ctModelLatex.R R/stan_unconstrainsamples.R R/plot.ctStanFit.R R/ctStanData.R R/ctStanPostPredict.R R/ctStanProfileCI.R R/ctStanFit.R R/ctTIpredAuto.R R/priorcheck.R R/ctModel.R R/JKalman.R R/ctsemUtils.R R/ctStanTIpredeffects.R R/plot.ctStanModel.R R/ctStanGenerateFromFit.R R/ctStanParMatrices.R R/zzz.R R/sgd.R R/extract.ctStanFit.R R/plothelpers.R R/ctDataHelp.R R/ctCheckFit.R R/ctStanGenerate.R R/ctDeintervalise.R R/ctdataupdate.R R/ctPlotArray.R R/isdiag.R R/ctStanModel.R R/ctSummarise.R R/ctDiscretePars.R R/ctStanKalman.R R/ctExtractComplexMatrix.R R/ctKalman.R R/stan_checkdivergences.R R/ctGenerate.R R/ctDiscretiseData.R R/stanWplot.R inst/doc/hierarchicalmanual.pdf tests/testthat.R tests/testthat/test-bivariatetrait_hmc.R tests/testthat/test-nonlinearVlinear.R tests/testthat/test_behavGenNLcor.R tests/testthat/test-dtVct.R tests/testthat/test-sunspots.R tests/testthat/test-knownFits.R tests/testthat/test-corrcheck.R tests/testthat/ctBinaryGaussianMix.R tests/testthat/test-stantipred.R tests/testthat/test-runExamples.R tests/testthat/test-ukfpoptest.R tests/testthat/test-timevarying.R tests/testthat/test-intervalise.R tests/testthat/test-ctLOO.R tests/testthat/test-fixedvalsunspot.R tests/testthat/test-reshaping.R tests/testthat/test-tdeffectvariation_covtest.R tests/testthat/test-bootHessian.R tests/testthat/test-ctRaschExampleTest.R man/inv_logit.Rd man/stanWplot.Rd man/ctExample4.Rd man/ctDeintervalise.Rd man/ctDiscretiseData.Rd man/ctStanGenerateFromFit.Rd man/test_isclose.Rd man/ctPostPredData.Rd man/isdiag.Rd man/ctWideToLong.Rd man/plot.ctStanFit.Rd man/ctDocs.Rd man/ctStanPostPredict.Rd man/ctStanDiscretePars.Rd man/ctstantestdat.Rd man/ctStanModel.Rd man/ctstantestfit.Rd man/ctsem-package.Rd man/ctResiduals.Rd man/ctAddSamples.Rd man/ctLOO.Rd man/ctFit.Rd man/ctChisqTest.Rd man/ctExtract.Rd man/log1p_exp.Rd man/ctStanFitUpdate.Rd man/ctStanGenerate.Rd man/ctExample2level.Rd man/ctLongToWide.Rd man/Oscillating.Rd man/ctACF.Rd man/ctPoly.Rd man/ctGenerate.Rd man/ctStanParnames.Rd man/ctModelHigherOrder.Rd man/ctStanContinuousPars.Rd man/ctStanUpdModel.Rd man/ctExample2.Rd man/ctExample1.Rd man/ctDensity.Rd man/ctKalman.Rd man/ctStanPlotPost.Rd man/plotctACF.Rd man/plot.ctKalmanDF.Rd man/ctFitMultiModel.Rd man/ctPostPredPlots.Rd man/ctStanDiscreteParsPlot.Rd man/ctPredictTIP.Rd man/plot.ctStanModel.Rd man/ctExample3.Rd man/ctIntervalise.Rd man/summary.ctStanFit.Rd man/stan_reinitsf.Rd man/stan_checkdivergences.Rd man/ctExample1TIpred.Rd man/ctModelLatex.Rd man/standatact_specificsubjects.Rd man/ctStanKalman.Rd man/sdpcor2cov.Rd man/ctStanTIpredeffects.Rd man/ctACFresiduals.Rd man/AnomAuth.Rd man/longexample.Rd man/stanoptimis.Rd man/stan_unconstrainsamples.Rd man/ctStanSubjectPars.Rd man/ctCollapse.Rd man/ctIndplot.Rd man/ctStanFit.Rd man/ctWideNames.Rd man/datastructure.Rd man/ctPlotArray.Rd man/ctModel.Rd man/ctCheckFit.Rd