Files in dMod
Dynamic Modeling and Parameter Estimation in ODE Models
MD5
NAMESPACE
DESCRIPTION
R/symmetryDetection.R
R/strings.R
R/parameters.R
R/classes.R
R/objClass.R
R/data.R
R/dMod.R
R/prediction.R
R/parClass.R
R/tools.R
R/symbolics.R
R/trust.R
R/eqnClass.R
R/prdClass.R
R/plots.R
R/trustL1.R
R/eventClass.R
R/dataClass.R
R/steadyStates.R
R/statistics.R
R/odeClass.R
inst/CITATION
inst/doc/dMod.R
inst/doc/dMod.html
inst/doc/dMod.Rmd
inst/examples/eqnvec.R
inst/examples/eqnlist.R
inst/examples/datalist.R
inst/examples/events.R
inst/examples/equations.R
inst/examples/plotting.R
inst/examples/errmodel.R
inst/examples/profiles.R
inst/examples/parvec.R
inst/examples/define.R
inst/examples/prediction.R
inst/examples/test_LOQ.R
inst/examples/odemodel.R
inst/examples/objective.R
inst/examples/sumdatalist.R
inst/examples/steadystates.R
inst/examples/normL2.R
inst/examples/parlist.R
inst/code/buildSystem.py
inst/code/sbmlAmiciDmod.py
inst/code/checkPredictions.py
inst/code/functions_obs.py
inst/code/symmetryDetection.py
inst/code/readData.py
inst/code/extendObservation.py
inst/code/quasiSteadyStates.py
inst/code/polyClass.py
inst/code/steadyStates.py
inst/code/functions.py
build/vignette.rds
vignettes/dMod.Rmd
vignettes/pathway.png
data/jakstat.tab.gz
man/as.parframe.Rd
man/long2wide.Rd
man/plus-.objlist.Rd
man/prdlist.Rd
man/plus-.datalist.Rd
man/compile.Rd
man/as.objlist.Rd
man/print.parfn.Rd
man/print.eqnlist.Rd
man/blockdiagSymb.Rd
man/jakstat.Rd
man/conservedQuantities.Rd
man/compare.Rd
man/coordTransform.Rd
man/obsfn.Rd
man/getDerivs.Rd
man/strpad.Rd
man/mname.Rd
man/ggopen.Rd
man/resolveRecurrence.Rd
man/funC0.Rd
man/controls.Rd
man/fitErrorModel.Rd
man/plotPrediction.Rd
man/Pimpl.Rd
man/normL2.Rd
man/predict.prdfn.Rd
man/Xf.Rd
man/format.eqnvec.Rd
man/parlist.Rd
man/Xs.Rd
man/write.eqnlist.Rd
man/repar.Rd
man/match.fnargs.Rd
man/attrs.Rd
man/parfn.Rd
man/res.Rd
man/wide2long.matrix.Rd
man/as.data.frame.dMod.Rd
man/wrss.Rd
man/odemodel.Rd
man/dot.Rd
man/grapes-.-times-grapes.Rd
man/as.eqnvec.Rd
man/rref.Rd
man/getObservables.Rd
man/prdframe.Rd
man/steadyStates.Rd
man/print.parvec.Rd
man/getCoefficients.Rd
man/objlist.Rd
man/constraintExp2.Rd
man/Xt.Rd
man/strelide.Rd
man/eventlist.Rd
man/parframe.Rd
man/as.data.frame.eqnlist.Rd
man/plus-.objfn.Rd
man/plotFluxes.Rd
man/theme_dMod.Rd
man/define.Rd
man/confint.parframe.Rd
man/prdfn.Rd
man/nullZ.Rd
man/subset.eqnlist.Rd
man/profile.Rd
man/summary.eqnvec.Rd
man/Xd.Rd
man/plot.datalist.Rd
man/constraintL2.Rd
man/Id.Rd
man/plus-.fn.Rd
man/wide2long.list.Rd
man/getFluxes.Rd
man/load.parlist.Rd
man/getReactions.Rd
man/scale_fill_dMod.Rd
man/getParameters.Rd
man/addReaction.Rd
man/getConditions.Rd
man/modelname.Rd
man/Pexpl.Rd
man/plotValues.Rd
man/plotPars.Rd
man/parvec.Rd
man/submatrix.Rd
man/symmetryDetection.Rd
man/lsdMod.Rd
man/plotCombined.Rd
man/combine.Rd
man/loadDLL.Rd
man/wide2long.Rd
man/plot.parlist.Rd
man/Y.Rd
man/progressBar.Rd
man/reduceReplicates.Rd
man/nll.Rd
man/stat.parlist.Rd
man/plotData.Rd
man/as.eventlist.Rd
man/plotProfile.Rd
man/times-.fn.Rd
man/getEquations.Rd
man/forcingsSymb.Rd
man/eqnlist.Rd
man/print.eqnvec.Rd
man/priorL2.Rd
man/unique.parframe.Rd
man/covariates.Rd
man/msParframe.Rd
man/datalist.Rd
man/objframe.Rd
man/P.Rd
man/plotPaths.Rd
man/getLocalDLLs.Rd
man/mstrust.Rd
man/as.parvec.parframe.Rd
man/trust.Rd
man/datapointL2.Rd
man/scale_color_dMod.Rd
man/eqnvec.Rd
man/print0.Rd
man/wide2long.data.frame.Rd
man/plotResiduals.Rd
man/expand.grid.alt.Rd
man/lbind.Rd
