plate_data: Plate data (droplets data)

In ddpcr: Analysis and Visualization of Droplet Digital PCR in R and on the Web

Plate data (droplets data)

Description

The main piece of information in every ddPCR plate is the droplets data, which contains the fluorescence intensities for every single droplet in every well. After a ddPCR plate gets analyzed, this data also includes the assigned cluster for each droplet. The plate data may be useful programatically, but it's not very useful to a human, so if you want to visualize the plate data you should instead plot it using plot.ddpcr_plate.

Usage

plate_data(plate)

Arguments

plate

A ddPCR plate

Value

A dataframe containing all the droplets in the plate, along with the assigned cluster of each droplet.

See Also

plate_meta
plot.ddpcr_plate

Examples

## Not run: 
plate <- new_plate(sample_data_dir())
plate_data(plate)

## End(Not run)

ddpcr documentation built on Aug. 21, 2023, 1:07 a.m.