compare_sample_subsets: Compares sample subset x against sample subset y

In demic: Dynamic Estimator of Microbial Communities

Compares sample subset x against sample subset y

Description

Compares sample subset x against sample subset y

Usage

compare_sample_subsets(
  est_ptrs_x,
  est_ptrs_y,
  pipeline_x,
  pipeline_y,
  cor_cutoff,
  max_cor
)

Arguments

est_ptrs_x	PTR estimates from sample subset x
est_ptrs_y	PTR estimates from sample subset y
pipeline_x	pipeline for sample subset x
pipeline_y	pipeline for sample subset y
cor_cutoff	the correlation cutoff
max_cor	the max correlation

Value

a named list including the est_ptr dataframe and a max_cor value

• sample: sample

• est_ptr: PTR estimate

• coefficient: coefficient of linear regression

• pValue: p-value of linear regression

• cor: correlation coefficient

• correctY: corrected coverage

demic documentation built on May 29, 2024, 10:05 a.m.