est_ptr | R Documentation |
Estimate PTRs using all input data as well as using subsets of contigs and samples
est_ptr(X)
X |
dataframe with coverage matrix (column names: "log_cov", "GC_content", "sample", "contig", "length") |
named list with results from all three methods all_ptr dataframe with the estimated PTRs on success, null otherwise
est_ptr: estimated PTR values
coefficient: coefficient of linear regression
pValue: p-value of linear regression
cor: correlation coefficient
correctY: corrected coverage
contigs_ptr dataframe with the estimated PTRs on success, null otherwise
est_ptr: estimated PTR values
coefficient: coefficient of linear regression
pValue: p-value of linear regression
cor: correlation coefficient
correctY: corrected coverage
samples_ptr dataframe with the estimated PTRs on success, null otherwise
est_ptr: estimated PTR values
coefficient: coefficient of linear regression
pValue: p-value of linear regression
cor: correlation coefficient
correctY: corrected coverage
est_ptrs_001 <- est_ptr(max_bin_003)
est_ptrs_001
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