Allows the calculation of both genetic diversity partition statistics, genetic differentiation statistics, and locus informativeness for ancestry assignment. It also provides users with various option to calculate bootstrapped 95\% confidence intervals both across loci, for pairwise population comparisons, and to plot these results interactively. Parallel computing capabilities and pairwise results without bootstrapping are provided. Also calculates Fstatistics from Weir and Cockerham (1984). Various plotting features are provided, as well as Chisquare tests of genetic heterogeneity. Functionality for the calculation of various diversity parameters is possible for RADseq derived SNP data sets containing thousands of marker loci. A shiny application for the development of microsatellite multiplexes is also available.
Package details 


Author  Kevin Keenan <[email protected]> 
Maintainer  Kevin Keenan <[email protected]> 
License  GPL (>= 2) 
Version  1.9.90 
URL  http://diversityinlife.weebly.com/ 
Package repository  View on CRAN 
Installation 
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