Man pages for driveR
Prioritizing Cancer Driver Genes Using Genomics Data
| create_features_df | Create Data Frame of Features for Driver Gene Prioritization |
| create_gene_level_scna_df | Create Gene-level SCNA Data Frame |
| create_noncoding_impact_score_df | Create Non-coding Impact Score Data Frame |
| create_SCNA_score_df | Create SCNA Score Data Frame |
| determine_double_hit_genes | Determine Double-Hit Genes |
| determine_hotspot_genes | Determine Hotspot Containing Genes |
| driveR | driveR: An R Package for Prioritizing Cancer Driver Genes... |
| example_cohort_features_table | Example Cohort-level Features Table for Driver Prioritization |
| example_cohort_scna_table | Example Cohort-level Somatic Copy Number Alteration Table |
| example_features_table | Example Features Table for Driver Prioritization |
| example_scna_table | Example Somatic Copy Number Alteration Table |
| KEGG_cancer_pathways_descriptions | KEGG "Pathways in cancer"-related Pathways - Descriptions |
| MTL_submodel_descriptions | MTL Sub-model Descriptions |
| predict_coding_impact | Create Coding Impact Meta-prediction Score Data Frame |
| prioritize_driver_genes | Prioritize Cancer Driver Genes |
| specific_thresholds | Tumor type specific probability thresholds |
