determine_double_hit_genes | R Documentation |
Determine Double-Hit Genes
determine_double_hit_genes(
annovar_csv_path,
gene_SCNA_df,
log2_hom_loss_threshold = -1,
batch_analysis = FALSE
)
annovar_csv_path |
path to 'ANNOVAR' csv output file |
gene_SCNA_df |
data frame of gene-level SCNAs (output of |
log2_hom_loss_threshold |
to determine double-hit events, the log2 threshold for identifying homozygous loss events (default = -1). |
batch_analysis |
boolean to indicate whether to perform batch analysis
( |
vector of gene symbols that are subject to double-hit event(s), i.e. non-synonymous mutation + homozygous copy-number loss
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