create_noncoding_impact_score_df: Create Non-coding Impact Score Data Frame

View source: R/utility.R

create_noncoding_impact_score_dfR Documentation

Create Non-coding Impact Score Data Frame

Description

Create Non-coding Impact Score Data Frame

Usage

create_noncoding_impact_score_df(annovar_csv_path, na.string = ".")

Arguments

annovar_csv_path

path to 'ANNOVAR' csv output file

na.string

string that was used to indicate when a score is not available during annotation with ANNOVAR (default = ".")

Value

data frame of meta-prediction scores containing 2 columns:

gene_symbol

HGNC gene symbol

CADD_phred

PHRED-scaled CADD score


driveR documentation built on Aug. 19, 2023, 5:12 p.m.