IPE: Estimating the ImmunoPrecipitation (IP) efficiency of a...

Description Usage Arguments Value Author(s) References See Also

View source: R/IPE.R

Description

Calculate the IP efficiency of an experiment by using the mixture model parameters.

Usage

1
IPE(para, method = NULL)

Arguments

para

A numeric vector. The parameters estimated by the mixture model.

method

A charater variable. Can be "poisson" or "NB" and it refers to the densities of the mixture distribution.

Value

IPE estimated value.

Author(s)

Yanchun Bao and Veronica Vinciotti

References

Bao et al. Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data. BMC Bioinformatics 2013, 14:169 DOI:10.1186/1471-2105-14-169.

See Also

See also mix, mix.joint,enrich.mix


enRich documentation built on March 13, 2020, 2:46 a.m.