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Description

p300cbp.200bp contains ChIP-seq counts in 200bp length bins on chromosome 21 for 8 experiments. The names of the 8 experiments are CBPT0, CBPT301, CBPT302, p300T0, p300T301, p300T302, WangCBP, Wangp300. The data are consistu

Usage

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Format

List of 2:
region:'data.frame', 234721 obs. of 3 variables, Chromosome, Start, Stop
count: 'numeric', 234721 obs. of 8 variables, CBPT0, CBPT301, CBPT302, p300T0, p300T301, p300T302, WangCBP, Wangp300

Source

The first 6 datasets are from the GEO database, accession number GSE21026.

The last 2 data sets are from the GEO database, accession number GSE15735.

References

Romas, et.al, 2010. Genome-wide assessment of differential roles for p300 and CBP in transcription regulation. Nucleic Acids Research, 38(16):5396-5408.

Wang, et.al, 2009. Genome-wide Mapping of HATs and HDACs Reveals Distinct Functions in Active and Inactive Genes. Cell, 138:1019-1031.

Examples

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