Man pages for epigraphdb
Interface Package for the 'EpiGraphDB' Platform

api_get_requestWrapper of httr::GET that handles status errors and custom...
api_post_requestWrapper of httr::POST that handles status errors and custom...
api_requestThe very general wrapper from EpiGraphDB endpoint request
confounderMR evidence on confounding traits between exposure and...
cypherSend a query in Cypher to EpiGraphDB
drugs_risk_factorsDrugs for risk factors
epigraphdb-packageepigraphdb: Interface Package for the 'EpiGraphDB' Platform
flatten_responseFlatten the "results" field from an API response to a tibble...
genetic_corGenetic correlations between traits
http_conditionModified httr::http_condition
literature_gwasLiterature evidence regarding a GWAS trait
mappings_gene_to_proteinReturn protein uniprot_id from associated genes
meta_nodes_listList meta nodes (e.g. Gwas, Gene, etc.)
meta_nodes_list_nodeList nodes under a meta node
meta_nodes_search_nodeSearch a node by its id field, or its name field
meta_rels_listList meta rels (e.g. MR, etc.)
meta_rels_list_relList relationships under a meta relationship
mrReturn information related to Mendelian Randomisation
obs_corObservational correlations between traits
ontology_gwas_efoOntology association between EFO term and Gwas
pathwayPathway evidence
pipePipe operator
pqtlReturn information related to the pQTL analysis
pqtl_listReturn a list of all proteins/exposures or traits/outcomes...
pqtl_pleioReturn information related to the pleiotropy of SNPs
protein_in_pathwayFor the list of proteins, returns their associated pathway...
query_epigraphdbSend data request to an EpiGraphDB API endpoint
stop_for_statusCatch error for an HTTP response
xqtl_multi_snp_mrMulti SNP QTL MR evidence
xqtl_single_snp_mrSingle SNP QTL MR evidence
epigraphdb documentation built on March 29, 2021, 5:11 p.m.