fslacos: Arc Cosine Transform Image using FSL

Description Usage Arguments Value Note

Description

This function calls fslmaths -acos. The R functions wraps fslmaths

Usage

1
2
3
4
fsl_acos(..., outfile = tempfile(fileext = ".nii.gz"), retimg = FALSE)

fslacos(file, outfile = NULL, retimg = TRUE, reorient = FALSE,
  intern = FALSE, opts = "", ...)

Arguments

...

additional arguments passed to readnii.

outfile

(character) resultant image name (optional)

retimg

(logical) return image of class nifti

file

(character) input image to arc cosine transform

reorient

(logical) If retimg, should file be reoriented when read in? Passed to readnii.

intern

(logical) to be passed to system

opts

(character) operations to be passed to fslmaths

Value

If retimg then object of class nifti. Otherwise, Result from system command, depends if intern is TRUE or FALSE.

Note

Functions with underscores have different defaults and will return an output filename, so to be used for piping



Search within the fslr package
Search all R packages, documentation and source code

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.