resampRepli: Bootstrap resample within replicates

In fullfact: Full Factorial Breeding Analysis

Bootstrap resample within replicates

Description

Bootstrap resample observations grouped by replicate identities within family identities for a specified number of iterations to create a resampled data set.

Usage

resampRepli(dat, copy, family, replicate, iter)

Arguments

dat	Data frame observed data to resample.
copy	Column numbers to copy.
family	Column name containing family identity information.
replicate	Column name containing replicate identity information.
iter	Number of iterations for resampling.

Details

The resampled data can be used for producing bootstrap confidence intervals.

Value

Because of the large file sizes that can be produced, the resampling of each replicate Y per family X is saved separately as a common separated (X_Y_resampR.csv) file in the working directory. These files are merged to create the final resampled data set (resamp_datR.csv).

See Also

resampFamily

Examples

data(chinook_length) #Chinook salmon offspring length
#resampRepli(dat=chinook_length,copy=c(3:8),family="family",replicate="repli",iter=1000)
#example with a couple iterations
#resampRepli(dat=chinook_length,copy=c(3:8),family="family",replicate="repli",iter=2)

fullfact documentation built on May 29, 2024, 1:21 a.m.