Calculate the gaps based on distance
count_gap: Count the number of gaps based on a threshold
In gapmap: Functions for Drawing Gapped Cluster Heatmap with ggplot2
Description
Usage
Arguments
Value
Description
This function counts the number of gaps based on the cutting the tree method.
It counts the number of branches that are above the threshold distance.
Usage
1
count_gap(d = d, count = 0, threshold = threshold)
Arguments
d
dendrogram class object
count
count
threshold
a numeric value for threshold
Value
the count of gaps
gapmap documentation built on May 29, 2017, 7 p.m.
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Description Usage Arguments Value
Description
This function counts the number of gaps based on the cutting the tree method. It counts the number of branches that are above the threshold distance.
Usage
1 | count_gap(d = d, count = 0, threshold = threshold)
|
Arguments
d |
dendrogram class object |
count |
count |
threshold |
a numeric value for threshold |
Value
the count of gaps
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