cn_setup: Download and set up DepMap CN
In gimap: Calculate Genetic Interactions for Paired CRISPR Targets
cn_setup R Documentation
Download and set up DepMap CN
Description
This function sets up the tpm data from DepMap is called
by the 'gimap_annotate()' function if the cn_annotate = TRUE
Usage
cn_setup(overwrite = TRUE, data_dir = gimap_data_dir())
Arguments
overwrite
Should the files be redownloaded?
data_dir
What directory should this be saved to? Default is a user data
directory.
gimap documentation built on July 10, 2026, 1:06 a.m.
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| cn_setup | R Documentation |
Download and set up DepMap CN
Description
This function sets up the tpm data from DepMap is called by the 'gimap_annotate()' function if the cn_annotate = TRUE
Usage
cn_setup(overwrite = TRUE, data_dir = gimap_data_dir())
Arguments
overwrite |
Should the files be redownloaded? |
data_dir |
What directory should this be saved to? Default is a user data directory. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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