qc_cor_heatmap: Create a correlation heatmap for the pgRNA CPMs

In gimap: Calculate Genetic Interactions for Paired CRISPR Targets

Create a correlation heatmap for the pgRNA CPMs

Description

This function uses the 'cor' function to find correlations between the sample CPM's and then plots a heatmap of these

Usage

qc_cor_heatmap(gimap_dataset)

Arguments

gimap_dataset

The special gimap_dataset from the 'setup_data' function which contains the transformed data

Value

'sample_cor_heatmap' a pheatmap

Examples

## Not run: 
gimap_dataset <- get_example_data("gimap")
qc_cor_heatmap(gimap_dataset)

## End(Not run)

gimap documentation built on June 8, 2025, 10:13 a.m.