summarise_sequence_distance: Summarise a sequence-distance object

View source: R/sequence-distances-clustering.R

summarise_sequence_distanceR Documentation

Summarise a sequence-distance object

Description

Summarise a sequence-distance object

Usage

summarise_sequence_distance(distance)

Arguments

distance

A distance object returned by compute_sequence_distance().

Value

A list containing an overall summary and per-sequence mean, median, minimum, and maximum distances.

Examples

sequences <- data.frame(
  sequence_id = rep(c("s1", "s2", "s3", "s4"), each = 4L),
  sequence_order = rep(1:4, times = 4L),
  state = c("A", "B", "C", "D", "A", "B", "C", "C",
            "D", "C", "B", "A", "D", "C", "A", "A"),
  group = rep(c("g1", "g2"), each = 8L),
  stringsAsFactors = FALSE
)
distance <- compute_sequence_distance(sequences)
summarise_sequence_distance(distance)


gp3sequences documentation built on Aug. 23, 2026, 5:10 p.m.