summarise_sequence_subsequences: Summarise non-contiguous subsequences

In gp3sequences: Transparent Analysis of Ordered Categorical Sequences

Summarise non-contiguous subsequences

Description

Summarise non-contiguous subsequences

Usage

summarise_sequence_subsequences(occurrences)

Arguments

occurrences

A result from extract_sequence_subsequences().

Value

A data frame with occurrence counts, sequence prevalence, and span diagnostics.

Examples

data <- data.frame(sequence_id = rep(c("a", "b"), each = 4L),
                   sequence_order = rep(1:4, 2L),
                   state = c("A", "B", "C", "D", "A", "C", "B", "D"))
summarise_sequence_subsequences(extract_sequence_subsequences(data))

gp3sequences documentation built on Aug. 23, 2026, 5:10 p.m.