tools/rbgen.R

# gdb:
# dir /opt/rbgen_v1.1.4/src/

library(rbgen)

ranges = data.frame(
  chromosome = "01",
  start = 1,
  end = 10000
)

dir <- "/home/joshua/vcu/gwsem"
d1 <- bgen.load(paste(dir, "inst/extdata/example.bgen", sep='/'), ranges)
colSums(d1$data[2,,])
d1$data[2,1:10,]

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gwsem documentation built on Jan. 18, 2022, 1:09 a.m.