getal.b: Converts diploid genotypic data into allelic data

In hierfstat: Estimation and Tests of Hierarchical F-Statistics

Converts diploid genotypic data into allelic data

Description

Converts a data frame of genotypic diploid data with as many lines as individuals (ni) and as many columns as loci (nl) into an array [ni,nl,2] of allelic data

Usage

getal.b(data)

Arguments

data	a data frame with ni rows and nl columns. Each line encodes one individual, each column contains the genotype at one locus of the individual

Value

an array [ni,nl,2] of alleles. The two alleles are stored in the third dimension of the array

Author(s)

Jerome Goudet [e-mail]

Examples

data(gtrunchier)
#multilocus diploid genotype of the first individual
gtrunchier[1,-c(1:2)]
#the diploid genotype splitted in its two constituent alleles
getal.b(gtrunchier[,-c(1:2)])[1,,]

hierfstat documentation built on May 6, 2022, 1:05 a.m.