Description Usage Arguments Details Author(s)
Calculates the coverage density.
1 2 3 4 |
folder |
folder with bam files |
chr |
Chromosome names to be plotted. |
chr.length |
Length of chromosome |
posneg |
Logical, plot pos and neg strand |
verbose |
Logical, verbose output |
use.sqrt |
Logical, apply sqrt transformation |
kernel.package |
Class of kernel smoother |
step.size |
Step size in bases |
window.size |
Window size in bases |
bw |
Bandwidth parameter |
This function calculates the coverage of bam-files
Daniel Fischer
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.